Constructors for bru_mapper objects

Constructors for bru_mapper objects

Usage

bru_mapper(...)

bru_mapper_define(mapper, new_class = NULL, remove_class = "list", ...)

Arguments

...

Arguments passed on to sub-methods, or used for special purposes, see details for each function below.

mapper

For bru_mapper_define, a prototype mapper object, see Details.

new_class

If non-NULL, this is added at the front of the class definition

remove_class

If non-NULL, this class or classes is removed from the class definition before adding the new_class names. Default is "list".

Value

A bru_mapper object.

Functions

• bru_mapper(): Generic mapper S3 constructor, used for constructing mappers for special objects. See below for details of the default constructor bru_mapper_define() that can be used to define new mapper clesses in user code. To extracting mappers for latent component models, see bru_get_mapper().

• bru_mapper_define(): Adds the new_class and "bru_mapper" class names to the inheritance list for the input mapper object, unless the object already inherits from these.

  To register mapper classes and methods in scripts, use .S3method() to register the methods, e.g. .S3method("ibm_jacobian", "my_mapper_class", ibm_jacobian.my_mapper_class).

  In packages with Suggests: inlabru, add method information for delayed registration, e.g.:

  #' @rawNamespace S3method(inlabru::bru_get_mapper, inla_rspde)
  #' @rawNamespace S3method(inlabru::ibm_n, bru_mapper_inla_rspde)
  #' @rawNamespace S3method(inlabru::ibm_values, bru_mapper_inla_rspde)
  #' @rawNamespace S3method(inlabru::ibm_jacobian, bru_mapper_inla_rspde)

  or before each method, use @exportS3Method:

  #' @exportS3Method inlabru::bru_get_mapper

  etc., which semi-automates it.

See also

bru_mapper_generics for generic methods, the individual mapper pages for special method implementations, and bru_get_mapper for hooks to extract mappers from latent model object class objects.

Other mappers: bm_aggregate(), bm_collect(), bm_const(), bm_factor(), bm_fm_mesh_1d, bm_fmesher(), bm_harmonics(), bm_index(), bm_linear(), bm_logitaverage(), bm_logsumexp(), bm_marginal(), bm_matrix(), bm_mesh_B(), bm_multi(), bm_pipe(), bm_repeat(), bm_scale(), bm_shift(), bm_sum(), bm_taylor(), bru_get_mapper()

Examples

mapper <- bm_index(5)
ibm_jacobian(mapper, input = c(1, 3, 4, 5, 2))
#> 5 x 5 sparse Matrix of class "dgCMatrix"
#>               
#> [1,] 1 . . . .
#> [2,] . . 1 . .
#> [3,] . . . 1 .
#> [4,] . . . . 1
#> [5,] . 1 . . .